Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYSRIALFGGFAAAALLAGCSASSGKPGGKDWTRWTCDSKAVIEWRYIDGSKNIVDLRLKDEDDVVHHLEQEPAAVGAFYSDGRLGFHLENDEGLVYWVETDDLIGRGCKAR----
2F09 Chain:A ((1-82))
----------------------------MQTDTLEYQCDEKPLT--VKLNNPRQEVSFVYDNQ---LLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVL--NNCQLQNPQR
General information:
TITO was launched using:
RESULT:
Template:
2F09.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24925 for 546 contacts (-45.7/contact) +
2D Compatibility (PS) -8087 + (NN) -978 + (LL) 1836
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -35604.0 ( -65.21 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_2F09.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F09-query.scw
PDB file :
Tito_Scwrl_2F09.pdb
: