Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQGRRANSAPQWAAYPVYPAFRAKNNKVNTFAERLQGCFQFSMNGKVPAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVAPPEGGYSIERGAKVYAAQCAICHGADGQGQMALGQTVFPPLWGAQSFNW--------GAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERPQDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI |
| 2XTS Chain:B ((7-124)) | --------------------------------------------------------------------------------------------------------------------------REALPEEISAWDTAVLPDGQGL----------------RPGSGDVATGDALFADNCASCHGDFAEGLD-----SWPVLAGGDGSLTDPRPVKTIGSYWPYLSTVYDYVHRSMPFGSAQTLSVDDTYAITAFLLYSNGLV-------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XTS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -29994 for 751 contacts (-39.9/contact) +
2D Compatibility (PS) -11362 + (NN) -4628 + (LL) 8856
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -42078.0 ( -56.03 by residue)
QMean score : 0.228
|
|
|