Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPHCETLLLEPIEGVLRITLNRPQSRNAMSLAMVGELRAVLAAVRDDRSVRALVLRGA-DGHFCAGGDIK-DMAGARAAGAEAYRTLNRAFGSLLEEAQAAPQLLVALVEGAVLGGGFGLACVSDVAIAAADAQFGLPETSLGILPAQI-APFVVRRIGLTQARRLALTAARFDGREALRLGLVHFCEADADALEQRLEETLEQLRRCAPNANAATKALLLASESGELG--ALLDDAARQFAEAVGGAEGSEGTLAFVQKRKPVWAQ
4ELX Chain:B ((32-280))
--------------DGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKV---------VHHLNVLD-----FQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLAD-LEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMT---EEGQEGRNAFNQKRQPDFSK
General information:
TITO was launched using:
RESULT:
Template:
4ELX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111201 for 1797 contacts (-61.9/contact) +
2D Compatibility (PS) -25151 + (NN) -14233 + (LL) 1800
1D Compatibility (HY) -10000 + (ID) 4000
Total energy: -162785.0 ( -90.59 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_4ELX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ELX-query.scw
PDB file :
Tito_Scwrl_4ELX.pdb
: