Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGILGFKML---DVKPADGTLYYFVGSDKLRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHATVDDKPVCSAEI--ICAERKL
3DOZ Chain:E ((14-159))
---IEHILQILPHRYPMLLVDRITELQ-ANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE-
General information:
TITO was launched using:
RESULT:
Template:
3DOZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117795 for 1055 contacts (-111.7/contact) +
2D Compatibility (PS) -15251 + (NN) -6738 + (LL) 720
1D Compatibility (HY) -16800 + (ID) 3550
Total energy: -159414.0 ( -151.10 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_3DOZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DOZ-query.scw
PDB file :
Tito_Scwrl_3DOZ.pdb
: