Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVAPRDSAAQAASAVAESVRYQGRKASRQGSEQRRQAILDAAMRLIVRDGVRAVRHRAVAAEAQVPLSATTYYFKDIDDLITDTFALFVERNAEALSAFWSSVEGDLQEMAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRL-RELADAHQRILSLGAVHFFQVL---G----SGQPEQDAKVLTSIILQMEYQGLVDGVE-QLAVDEMRAILRRYLNLVMGL
3CWR Chain:A ((11-203))
----------------------------PAVPDAVVRESIVGAAQRLLSSGGAAAMTMEGVASEAGIAKKTLYRFASGRADLIGLLVESWIAPIFPGFEADP---------------------QDAAAALERIVYDIAQAVLS-RE-AVSLFRMLASDADLRNRFLPAYNANGIERSRRELARWLDQQASAGRLPLPIPAERVADLLLSAVIAEPLRQITLGLREPLPAWDIAPRVADAVRLIA--
General information:
TITO was launched using:
RESULT:
Template:
3CWR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121628 for 1392 contacts (-87.4/contact) +
2D Compatibility (PS) -20057 + (NN) -8964 + (LL) 3728
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: -152021.0 ( -109.21 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_3CWR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CWR-query.scw
PDB file :
Tito_Scwrl_3CWR.pdb
: