Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAK-PSREDTVRTHYHGTLIDGTVFDSSYQRGQP--AEFPVGGVIAGWVEALQLMNAGSKWRLHVPSELAYGGQAV-GSIPPHSVLVFDVELLEIL |
1YAT Chain:A ((3-112)) | --------------------------------------------------------------------------------------------------VIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59029 for 771 contacts (-76.6/contact) +
2D Compatibility (PS) -11230 + (NN) -719 + (LL) 7004
1D Compatibility (HY) -9200 + (ID) 2400
Total energy: -75574.0 ( -98.02 by residue)
QMean score : 0.567
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