Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRHSKRTYCPDWDDKDWDYGKWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEKDYHSRRYIDEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRIHHSTSHRRSHGKSHRRKRTRSVEDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH------GHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILA-LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSR----RCKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI |
| 1CM8 Chain:A ((23-315)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------VRAVYRDLQPV------AVCSAVDG-RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH--EN----VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE-------------------DCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD--------------EAKNYMKGLPELEKKDFASIL---TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHQVQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205722 for 2162 contacts (-95.2/contact) +
2D Compatibility (PS) -29355 + (NN) -7904 + (LL) 8012
1D Compatibility (HY) -26000 + (ID) 4000
Total energy: -264969.0 ( -122.56 by residue)
QMean score : 0.467
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