Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------------------------------------------------MQKLAVFDFDSTLVNAETIESLARAWGVFDEVREITLKAMNGETDFHKSLILRVSKLKNMPLKLAKEVCESLPLFEGAFELISALKEKNYKVVCFSGGFDLATNHYRDLLNLDAAFSNTLIVENNALNGLVTGHMMFSYSKGEMLLALQRLLNISKDRTLVVGDGANDLSMFKHAHIKIAFNAKEILKQHATHCIDKPNLALIKPLI------------- |
3N28 Chain:A ((3-325)) | LDALTTLPIKKHTALLNRFPETRFVTQLAKKRASWIVFGHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDYARIQDVPDLTKPGLIVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLKDAPEQILSQVRETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAYHAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3N28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -138749 for 1732 contacts (-80.1/contact) +
2D Compatibility (PS) -23317 + (NN) -16054 + (LL) 0
1D Compatibility (HY) -14000 + (ID) 3850
Total energy: -195970.0 ( -113.15 by residue)
QMean score : 0.591
|
|
|