Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAEGLRTIYFVRHGKTEWNMTGQMQGWGDSPLVAEGIDGAKAVGEVLKD--MQIDAVYTSTSKRTQDTAAYILGDRE---IEIQPLEELKEMGFGTWEGIRVTEIDEKHPEERAKILHSPETYK--AEVNGGETYYELAERLLEGVEKIIAD--NPNGNILVVSHGMSLTLLLYL-LQGGTIEDHRKEAPRILNTSISIVEYQN-GEFSLKKINEIGHLDLK
1FZT Chain:A ((4-211))
-EAAPNLLVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAFTSALQRAQKTCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQ----VQIWRRSYDIAPPNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALIMDLEGLTGDQIVK--R-ELATGVPIVYHLDKDGKYVSKELIDN------
General information:
TITO was launched using:
RESULT:
Template:
1FZT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54752 for 1649 contacts (-33.2/contact) +
2D Compatibility (PS) -20956 + (NN) -3113 + (LL) 1004
1D Compatibility (HY) -4400 + (ID) 2450
Total energy: -84667.0 ( -51.34 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_1FZT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FZT-query.scw
PDB file :
Tito_Scwrl_1FZT.pdb
: