Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKMKWIIAISIIIVLLVVGWFLGTRLTVKKYEVSSTKIEKEIKLVQLSDLHFSE----------FGDKNEKLLHKVENLN--PDVIAITGDLFDRQGDSVPKELIKKLTKIA-----PVYFSPGNHEYDVKNAYEDDYKPFLEKMGVVNLEDKTATIDVGGQKFQMSGLRSSANLDYDYSYYKKGLAEIQTQ---QDSQYYQVLLSHMP-----------------DYFKLYVENDFDLTLSGHTHGGIVRIPYTNIGAIAPGPQRTILPEYVYGEHSKNGKT---MIISAGLGAGSLHQKAFPRLGNPYEIVAVTIKPELK------------- |
| 3IB7 Chain:A ((16-310)) | ---------------------------------LRAAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNH---------DDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTVVHSVIPLGGGETVGTFVSPGQARRKIAESGIFIEPSRRD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44736 for 1860 contacts (-24.1/contact) +
2D Compatibility (PS) -25877 + (NN) -11496 + (LL) 4664
1D Compatibility (HY) 400 + (ID) 1850
Total energy: -78895.0 ( -42.42 by residue)
QMean score : 0.301
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