Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIKRHSIFLWLTTSILAILMAVGMTIYFNTYQASPLARRIAKTATNHKNYLLFRSKGKVKANIIFYQG--ALVEEEAYSQLARDLADKGYNTYILKTPLNL------PVLSPHKAKTIINQN------HLTNVYLAGHSLGGVVASQNAKVAPVRGLILLASYPS----------RKSDLSHKKLRVLSITASNDHILNWEKYEEAKKRLPNSS---TFRTIVGGNHS-RFGNYGHQKGDGKATLSH-KSSEKQLATFISNFIH- |
| 4Q3K Chain:A ((20-260)) | ---------QGMNISKITINQHVGVTLTCYVQDVSQE----------------MSNMSKRPAMLIFPGGGYQFCSDREAEPIALSYLAKGYNAFVLRYSVKEHAVFPRPLIDAEDALSYLKDNAHALHINPDKIAVIGFSAGGHLATTLATEGKVRPNAVVLGYPALIRHEKYWNFPTPKVDQQTPEMFVFHTFEDDLVPLSHPLYIVEELSKANIPVEFHLFKSGVHGLSLGNKIVSNGLDKMIEDDVQVWFDLSCRWLDKVLDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53245 for 1734 contacts (-30.7/contact) +
2D Compatibility (PS) -22685 + (NN) -3661 + (LL) 2244
1D Compatibility (HY) -8400 + (ID) 1950
Total energy: -87697.0 ( -50.57 by residue)
QMean score : 0.437
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