Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHQILQNYINSHNLPIIEKDYHKYLTFESLE--EDYTYILKDGIVKQSVLSKYGTEFNLRYVTGLEITSILNTDYSQHMG-EPYNVRIESETAHFYKVRRSTFLKDINNDIELQGYVKDFYHNRLEKSMKKMQCMLTNGRIGAISTQLYDLSKMFGEERDNGDIYINFVITNEELGKFCGISTGSSVSRILKQLKDDHIIRIEKQHIIITNVEKLKDHIVF
2ZCW Chain:A ((6-196))
---------------ETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEE----ALFGQERIYFAEAA-TDVRLEPLPEN-------PDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHE--EEGKVVLKATHDELAAAVGS-VRETVTKVIGELAREGYIRSGYGKIQLLDLKGLKELAES
General information:
TITO was launched using:
RESULT:
Template:
2ZCW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62851 for 1378 contacts (-45.6/contact) +
2D Compatibility (PS) -19757 + (NN) -1025 + (LL) 1288
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -88545.0 ( -64.26 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_2ZCW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZCW-query.scw
PDB file :
Tito_Scwrl_2ZCW.pdb
: