Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKILFFGEPLIRITPKENDYFADSISTKLFYGGSEVNTARALQGFGQDTKLLSALPNNPIGNSFLQFLKAQGIDTHSIQWVGERVGLYFLEDSFACRKGEVVYDRDHSSLHDFRI---NQIDFDQLFEGVSLFHFSGITLSLDESIQEITLLLLKEAKKREITISLDLNFRSKLISPKNAKILFSQFATFADICFGIEPLMVDS-QDTTFFNRDEATIEDVKERMISLINHFDFQVIFHTKRLQDEWGRNHY-----QAYIANRKQEFVTSKEITTAVNQRIGSGDAFVAGALYQLLQHSDSKTVIDFAVASASLKCALEGDNMFETV-TAVNKVLNQSKDIIR |
| 2AFB Chain:A ((13-343)) | -MKVVTFGEIMLRLSPPDHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQ-RPSKVVYDR--AHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEG----LNREAYAKIAEEVTRKYNFK-----TVGITLRESISATVNYWSVMVFENG-QPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFDSQKKAEFAAAASCLKHTIPGDF-VVLSIEEIEKLASG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126548 for 2803 contacts (-45.1/contact) +
2D Compatibility (PS) -33272 + (NN) -7655 + (LL) 1792
1D Compatibility (HY) -11600 + (ID) 3950
Total energy: -181233.0 ( -64.66 by residue)
QMean score : 0.460
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