Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEATRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVRVLKEVLQTRMNFEMGVTEEMLAFAEEIRPAHSCLVPERREELTTEGGLDVAGQEQRIRDAVRRLAAVGSEVSLFIDPDPRQIEASARVGAPAIELHTGRYADAEDPEEQARELQRVREGVALGRSLGLIVNAGHGLHYHNVEPVAAIDGINELNIGHAIVAHALFVGFRQAVAEMKALMLAAATKR
3GK0 Chain:A ((31-271))
-----AIDLGVNIDHVATLRNARGTAYPDPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPRVKTRMNLECAVTPEMLDIACEIRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPDEAQIRAAHETGAPVIELHTGRYADAHDAAEQQREFERIATGVDAGIALGLKVNAGHGLHYTNVQAIAALPGIAELNIGHAIVAHAVFVGWDNAVREMKAIMVAARVAA
General information:
TITO was launched using:
RESULT:
Template:
3GK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138131 for 2148 contacts (-64.3/contact) +
2D Compatibility (PS) -26542 + (NN) -12179 + (LL) 560
1D Compatibility (HY) -23600 + (ID) 7950
Total energy: -207842.0 ( -96.76 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3GK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GK0-query.scw
PDB file :
Tito_Scwrl_3GK0.pdb
: