Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGAAAHSISPRAVWQFRNMIKCTIPGSDPLKDYNNYGCYCGLGGWGTPVDDLDRCCQTHDHCYSQAKKLESCKFLIDNPYTNTYSYSCSGSEITCSAKNNKCEDFICNCDREAAICFSKVPYNKEYKNLDTGKFC
2BAX Chain:A ((1-119))
----------------------ALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYMQAMKLDSCKVLVDNPYTNNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLD-----
General information:
TITO was launched using:
RESULT:
Template:
2BAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59629 for 896 contacts (-66.6/contact) +
2D Compatibility (PS) -12642 + (NN) -7814 + (LL) 2356
1D Compatibility (HY) -16000 + (ID) 4750
Total energy: -98479.0 ( -109.91 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_2BAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BAX-query.scw
PDB file :
Tito_Scwrl_2BAX.pdb
: