Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAAL-GPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW |
3LEZ Chain:A ((4-257)) | -----------------------------DLKKLEEEFDVRLGVYAIDTGADKEI-SYRENERFAYTSTFKPLAVGAVLQTKSD--EELEETITYSEEDLVTYSPITEQHVDEGMTLVEIADAAIRYSDNTAGNLLLEAMGGPDELETILRDIGDETIEMDRYETELNEAKPGDIRDTSTAKAMATTLQQYVLEDVLDADRREVLTNMLINNTTGDALIRAGVPDGWTVGDKTGAGGYGTRNDIGIIWPEGDEEPIVIAIMSSRDEEDADYDDKLIEKATEIVLQE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131514 for 2281 contacts (-57.7/contact) +
2D Compatibility (PS) -26788 + (NN) -12975 + (LL) 3236
1D Compatibility (HY) -17600 + (ID) 4800
Total energy: -190441.0 ( -83.49 by residue)
QMean score : 0.708
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