Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
4DRI Chain:A ((36-142))
-GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK
General information:
TITO was launched using:
RESULT:
Template:
4DRI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52506 for 779 contacts (-67.4/contact) +
2D Compatibility (PS) -11639 + (NN) -5153 + (LL) 208
1D Compatibility (HY) -8000 + (ID) 2550
Total energy: -79640.0 ( -102.23 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_4DRI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DRI-query.scw
PDB file :
Tito_Scwrl_4DRI.pdb
: