Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLFKIRMPETVAEGTRLALRAFSLVVAVDEHGGIGDGRSIPWNVPEDMKFFRDLTTKLRGKNVKPSPAKRNAVVMGRKTWDSIPPKFRPLPGRLNVVLSSTLTTQHLLDGLPDEEKRNLHADSIVAVNGGLEQALRLLASPNYTPSIETVYCIGGGSVYAEALRPPCVHLLQAIYRTTIRASESSCSVFFRVPESGTEAAAGIEWQRETISEELTSANGNETKYYFEKLIPRNREEEQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELLWFLRGETYAKKLSDKGVHIWDDNGSR--AFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYT-------------------HHDANYDG--------QGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQF--YVSNGELSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQLKRVPRAFPYLVFRREREFLEDY--------EE---GDMEVIDYAPYPPISMKMAV |
3V8H Chain:A ((5-318)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKQYLDLVRTILDTGTWQSN--GIRTIGIPGAMLRFDLQQG-FPAVTTKKLAFKSAIGELVGFLRATRSAAEFRALGCKVWDANANENAQWLA--NPYRRGADDLGDVYGVQWRRWPG-YKVLDAHADAQIADATSRGFRIVARFEEGGADKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWNPAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLTGYSPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLELAERVPDYAKTGKYEPQWLERVEPSDFTLVGYRHH--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169809 for 2054 contacts (-82.7/contact) +
2D Compatibility (PS) -28749 + (NN) -9707 + (LL) 15600
1D Compatibility (HY) -22000 + (ID) 4900
Total energy: -219565.0 ( -106.90 by residue)
QMean score : 0.221
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