Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----MMSFAPNASHSPVFLLLGFSRANISYTLLFFLFLAIYLTTILGNVTLVLLISWDSRLH-----SPMYYLLRGLSVIDMGLS--TVTLPQLLAHLVSHYPTIPAARCLAQFFFFYAFGV-TDTLVIAVMALDRYVAICDPLHYALVMNHQRCACLLALSW---VVSILHTMLRVGLVL------PLCWTGDAGGNVNLPHFFCDHRPLLRASCSDIHSNELAIFFE-GGFLMLGPCALIVLSYVRIGAAILRLPSAAGRRRAVS--TCGSHLTMVGFLYGTI--------ICVYFQPPFQNSQYQDMVASVMYTAITPLANPFVYSLHNKDVKGALCRLLEWVKVDP |
3P4G Chain:A ((23-323)) | HSFDHYIGSAFDASNNNVAV-----TGNVSATLN--VLAGDDKVSIDGNVEDVLVAANVAVLDMGTGNDQLYVAGDVLGKIDAGTGNDEIYIKGDVSAAVDAGTGNDEVYIGGNLSGDLDAGTDNDNIQIGGDVNAALNA--GTGNDNLIIGHD-VSGIVNMGTDNDTVEVGRTINASGKVLLDTGDDSLLVSGDLFGEVD----------------GGTGNDTIIIAGKVSGNIQGGT-----------GNDIVRVQSQVWAEANISLGTGDDVLIVEHELHGTVAGNEGDDSIYLKFYTKEQYNNNSDLRNRV--------ANFEHIRVSDGVVKGSPADFADY----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3P4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -321667 for 2278 contacts (-141.2/contact) +
2D Compatibility (PS) -27687 + (NN) 8967 + (LL) 4388
1D Compatibility (HY) -2800 + (ID) 3000
Total energy: -341799.0 ( -150.04 by residue)
QMean score : 0.187
|
|
|