Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAPSPSGGGGSGGGSGSGTPGPVGSPAPGHPAVSSMQGKRKALKLNFANPPFKSTARFTLNPNPTGVQNPHIERLRTHSIESSGKLKISPEQHWDFTAEDL-KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIP----EEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPSSPMYVD |
| 4NZW Chain:B ((13-288)) | ---------------------------------------------------------------------------------------------HSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGG---------SALDLLKPGPLEETYIATILREILKGLDYLHSERKI-HRDIKAANVLLSEQGDVKLAAFGVAG-------------TPFWMAPEVIKQ------YDFKADIWSLGITAIELAKGEPPNSDLHPM-RVLFLIPKNSPPTL----EGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKK----TSFLTELIDRYKRWKS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124810 for 2027 contacts (-61.6/contact) +
2D Compatibility (PS) -26858 + (NN) -17351 + (LL) 3292
1D Compatibility (HY) -19600 + (ID) 4750
Total energy: -190077.0 ( -93.77 by residue)
QMean score : 0.369
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