Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNNIIESFGRDQLENFINYKNKIGIGALDIALNSGNKKAIEVLKSYGADIENR-VDGESRLLRALKEGNIEKMELLLS
3UTM Chain:A ((541-604))
---------------GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLL-
General information:
TITO was launched using:
RESULT:
Template:
3UTM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2684 for 445 contacts (-6.0/contact) +
2D Compatibility (PS) -7215 + (NN) -4698 + (LL) 728
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -17219.0 ( -38.69 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_3UTM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UTM-query.scw
PDB file :
Tito_Scwrl_3UTM.pdb
: