Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLSDARSISYMSDIISIASDHAGYELKSEIKSYLETLGCKVLDRGCTAEQKCVDYPDYAVKIAEDIINKKADYGILICGTGLGMSIVANRFKGIHAVLCNSVEITKLAREHGNANVLCLGARFTASGLAKDIVKQFLETEFSKESRHKRRLDKLSNIASFSKRKKVQTYNEDEVSKFAKMVGEWWDENGKFKPLHMMNPVRVSYIIEKIKELKKCDLKKLSLLDVGCGGGILSESIARVGINVLGIDVCEENIKVAQSHAKKVGLNIEYTHTSIEELSNNQKYDVVLLMEVVEHVDNLELFIKKAIELLKPEGLIFISTINRTFKSFFLAIIGAEYILNWLPKGTHNWNKFLKPSEIANHLREGNVTLQDMAGMEYNIIKSEWNLTKGVDVNYILCGVMNS |
1USL Chain:A ((14-154)) | ---------------VYLGADHAGYELKQRIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVADPGSLGIVLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFVTTPWSKAQRHQRRIDILAEYERTHEAPPVPG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1USL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118861 for 1207 contacts (-98.5/contact) +
2D Compatibility (PS) -15231 + (NN) -6400 + (LL) 18288
1D Compatibility (HY) -4800 + (ID) 2550
Total energy: -129554.0 ( -107.34 by residue)
QMean score : 0.576
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