Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCT---EETERSAGGFGSSGR
3P48 Chain:C ((9-133))
--------LKIQLRSASA----TVPTKGSATAAGYDIYAS--QDITIPAMGQGMVSTDISFTVPVGTYGRIAPRSGLAVKNGIQ--TGAGVVDRDYTGEVKVVLFNHSQRDFAIKKGDRVAQLILEK----IVDDAQIVVVDSLE--------------
General information:
TITO was launched using:
RESULT:
Template:
3P48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70122 for 846 contacts (-82.9/contact) +
2D Compatibility (PS) -13134 + (NN) -4160 + (LL) 1488
1D Compatibility (HY) -9600 + (ID) 2400
Total energy: -97928.0 ( -115.75 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_3P48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P48-query.scw
PDB file :
Tito_Scwrl_3P48.pdb
: