Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSPEFAINALNSLLKSKNEVVAVYTKAPKPSGRGQKLTKSPVHIIAEESGIEVCTPTSLKPLVEQEKFKKFKPDVAVVAAYGLILPKEILNILKYSCINIHPSLLPRWRGAAPIQHTILAGDRKTGISIMQLDGGLDSGPILKQKKFLVEKNDNYKTLHDKLSKLGSNLLMEVIDEIEK--HPPLEQSDDGACYADKIED--YKIYASDICEVAYRKVKAFYPKA--FVKIEHKRVRILDADFEVDASLTSGQGKII---NDNMHISLKSGTLIPKIVQMEGRNSCNIKDFVRGLKF--SMVKKFIE |
| 1FMT Chain:A ((9-313)) | AGTPDFAARHLDALLSSGHNVVGVFTQPDRP------LMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASVIDTA-TNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRLV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150230 for 2315 contacts (-64.9/contact) +
2D Compatibility (PS) -30979 + (NN) -10691 + (LL) 88
1D Compatibility (HY) -18800 + (ID) 5150
Total energy: -215762.0 ( -93.20 by residue)
QMean score : 0.535
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