Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER
4KAS Chain:C ((17-221))
-------------------------ILDKGFVELVDVMGNDLSAVRAARVSFD---KDEERDRHLIEYLMKHGDETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELSGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDILKEVQV-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4KAS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153978 for 1471 contacts (-104.7/contact) +
2D Compatibility (PS) -20960 + (NN) -1024 + (LL) 4832
1D Compatibility (HY) -19200 + (ID) 4800
Total energy: -195130.0 ( -132.65 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_4KAS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KAS-query.scw
PDB file :
Tito_Scwrl_4KAS.pdb
: