Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEE-------------------------ELESALL--KADFIVHLAGVNRPE----HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPN-YNSVIATFCYKIARNEE--IQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLEV |
| 1RPN Chain:A ((15-279)) | RSALVTGITGQDGAYLAKLLLEKG-YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK---ADDYVVATGVTTTVRDMCQIAFEHVGLDY----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121763 for 1784 contacts (-68.3/contact) +
2D Compatibility (PS) -23061 + (NN) -8867 + (LL) 8040
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -152601.0 ( -85.54 by residue)
QMean score : 0.554
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