Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNVDGKIVSADVQAQTKQVLENLKVVLEEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNE---HKPARSCVEVARLPKDVKVEIELVSKIKEL
1QU9 Chain:A ((2-128))
SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARS-VEVARLPKDVKIEIEAIAVRR--
General information:
TITO was launched using:
RESULT:
Template:
1QU9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27524 for 933 contacts (-29.5/contact) +
2D Compatibility (PS) -13315 + (NN) -6941 + (LL) 336
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -59194.0 ( -63.44 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_1QU9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QU9-query.scw
PDB file :
Tito_Scwrl_1QU9.pdb
: