Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQKPVDNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTIVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKEL--KEEHGYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEY-PNIEIVAIEPEASPVLS---GGE---PGPHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAAIQKAK--ELGKGKTVVTVLPSNGERYLSTPLYSFDD |
| 4ZU6 Chain:X ((27-327)) | ------------IGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKG--GAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTD-GKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADRLAKLPEFAD-KLIVVILPSASERYLSTALF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZU6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 102735 for 2704 contacts (38.0/contact) +
2D Compatibility (PS) -30038 + (NN) -9576 + (LL) 1008
1D Compatibility (HY) 9200 + (ID) 1600
Total energy: 71729.0 ( 26.53 by residue)
QMean score : 0.098
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