Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLAEAGRTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENP-PIPGHYDGVGIEIVRENK
1SQL Chain:A ((21-140))
-GDKLILKGLKFYGFHGAIAEERTLGQMFLVDIDAWVSLKKAGESDNLEDTISYVDIFSLAKEIVEGSPRNLLETVAELIASKTLEKFHQINAVRVKLSKPNVALIKSTIDYLGVDIFRQR-
General information:
TITO was launched using:
RESULT:
Template:
1SQL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58913 for 856 contacts (-68.8/contact) +
2D Compatibility (PS) -13046 + (NN) -5167 + (LL) 272
1D Compatibility (HY) -12000 + (ID) 2300
Total energy: -91154.0 ( -106.49 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_1SQL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SQL-query.scw
PDB file :
Tito_Scwrl_1SQL.pdb
: