Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLVPLLLALLLLVAACGTGGKQSSDKSNGKLKVVTTNSILYDMAKNVGGDNVDIHSIVPVGQDPHEYEVKPKDIKKLTDADVILYNGLNLET-GNGWFEKALEQAGKSLKDKKVIAVSKDVKPIYLNGEEGNKD--KQDPHAWLSLDNGIKYVKTIQQTFIDNDKKHKADYEKQGNKYIAQLEKLNNDSKDKFNDIPKEQRAMITSEGAFKYFSKQYGITPGYIWEINTEKQGTPEQMRQAIEFVKKHKLKHLLVETSVDKKAMESLSEETKK--DIFGEVYTDSIGKEGTKGDSYYKMMKSNIETVHGSMK- |
| 1PSZ Chain:A ((18-303)) | -----------------------KKDTTSGQKLKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDVKKTSEADLIFYNGINLETGGNAWFTKLVENAKKTENK-DYFAVSDGVD---VIYLEGQNEKGKEDPHAWLNLENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLVEKLRQTKVPSLFVESSVDDRPMKTVSQDT--NIPIYAQIFTDSIAEQGKEGDSYYSMMKYNLDKIAEGLAK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -43008 for 2392 contacts (-18.0/contact) +
2D Compatibility (PS) -30628 + (NN) -16303 + (LL) 2424
1D Compatibility (HY) -26400 + (ID) 7000
Total energy: -120915.0 ( -50.55 by residue)
QMean score : 0.530
|
|
|