Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVGIKGFGAYAPEKIIDNAYFEQF-LDTSDEWISKMTGIKERHWADDDQ--DTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKITD--LTDRSTAVLFGDGAGAVIIGEVSEGRGIISYEMGSDGTGGKHLYLDKDTGK----------LKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIMESARERLGISKDKM--SVSVNKYGNTSAASIPLSIDQELKNGKLKDD----DTIVLVGFGGGLTWGAMTIKWGK- |
| 1UB7 Chain:A ((2-322)) | --SGILALGAYVPERVMTNADFEAYL-DTSDEWIVTRTGIKERRVAAE--DEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLK-AFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKIIDWN--DRATAVLFGDGGGAAVVGKVREGYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWER-VA-VNVDRYGNTSTASIPLALKEAVDA----GRIREGDHVLLVSFGAGLTWAAAVLTWGGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155081 for 2805 contacts (-55.3/contact) +
2D Compatibility (PS) -32521 + (NN) -14274 + (LL) 952
1D Compatibility (HY) -26000 + (ID) 7500
Total energy: -234424.0 ( -83.57 by residue)
QMean score : 0.517
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