Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGH---VFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
3JW5 Chain:A ((7-166))
MRVSFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTMGHPLIMGRKNYEAIGRPLPGRRNIIVTRNEGYHVEGCEVAHSVEEVFELCKNEEEIFIFGGAQIFDLFLPYVDKLYITKIHHAFEGDTFFPEMDMTNWKEVFVEKGLTDEKN--PYTYYYHVYEK
General information:
TITO was launched using:
RESULT:
Template:
3JW5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104070 for 1160 contacts (-89.7/contact) +
2D Compatibility (PS) -17008 + (NN) -5022 + (LL) 256
1D Compatibility (HY) -16800 + (ID) 3600
Total energy: -146244.0 ( -126.07 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_3JW5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JW5-query.scw
PDB file :
Tito_Scwrl_3JW5.pdb
: