Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVDADKPSSPCGACRQVLKELCDDDMPVYMTNHKGDMVMMTVAELLPFGFSGKDLE
1UWZ Chain:A ((2-130))
--NRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAEATALFKAVSEGDT--EFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSEDL-
General information:
TITO was launched using:
RESULT:
Template:
1UWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43487 for 1034 contacts (-42.1/contact) +
2D Compatibility (PS) -14399 + (NN) -10145 + (LL) -28
1D Compatibility (HY) -10000 + (ID) 3050
Total energy: -81109.0 ( -78.44 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_1UWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UWZ-query.scw
PDB file :
Tito_Scwrl_1UWZ.pdb
: