Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKTFYNGNTMPQIGLGTF---RVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGT------------------NEAVMVDTWKGMEDLYKNNKAKNIGVSNFEPEHLEALLAQVSIK--PVINQVEYHPYLTQHKLKLYLAAQHIVMESWSPLMNAQ-----------ILNDETIKDIAQELGKSPAQVVLRWNVQHGVVIIPKSVTPNRISENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKTFEG |
| 3UZZ Chain:B ((34-328)) | -------DGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIHVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRF--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UZZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102789 for 2188 contacts (-47.0/contact) +
2D Compatibility (PS) -27896 + (NN) -10553 + (LL) 496
1D Compatibility (HY) -29200 + (ID) 5550
Total energy: -175492.0 ( -80.21 by residue)
QMean score : 0.470
|
|
|