Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
4JLB Chain:B ((1-202))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPKHG---NVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPP-------PGVKVIQREDDKPEVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVI---
General information:
TITO was launched using:
RESULT:
Template:
4JLB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74696 for 1559 contacts (-47.9/contact) +
2D Compatibility (PS) -21747 + (NN) -11369 + (LL) 928
1D Compatibility (HY) -20400 + (ID) 4450
Total energy: -131734.0 ( -84.50 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_4JLB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JLB-query.scw
PDB file :
Tito_Scwrl_4JLB.pdb
: