Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVH-----SKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL
3O4V Chain:B ((4-231))--KIGIIGAMEEEVTLLRDKI-ENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFP----QAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKL


General information:
TITO was launched using:
RESULT:

Template: 3O4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143358 for 2029 contacts (-70.7/contact) +
2D Compatibility (PS) -23384 + (NN) -4189 + (LL) 556
1D Compatibility (HY) -15200 + (ID) 4050
Total energy: -189625.0 ( -93.46 by residue)
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_3O4V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3O4V-query.scw
PDB file : Tito_Scwrl_3O4V.pdb: