Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFKKGVILDAKSVGLKALEVLKEVADFDFYEVTSPNQIVE-RSIEAEIMVLN-KVVITQEVLSQLPKLKLICITATGTDNVDIKSAKALGIEVKNVSAYSTESVAQHTLACALSLLGRINDYDRYCKSGEYSQSDI-------FTHISDIKMGLIKGGQWGVIGLGNIGKRVAKLAQAFGAKVVYFSPKDKKE-----EYE-RLSLEELLKTSGIISIHAPLNESTRDLIALKELQSLKDGAILINVGRGGIVNEKDLALILET-KDLYYASDVFVKEPFEK-DHAFLNPKIQNKLLLTPHIAWAYSDSLKTLVEKTKENIQDFLASQK |
| 1MX3 Chain:A ((21-337)) | ---MPLVALLDGRD-CTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTR-VQSVEQIREVASGA------ARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPL-K--DAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174138 for 2435 contacts (-71.5/contact) +
2D Compatibility (PS) -32482 + (NN) -11165 + (LL) 1164
1D Compatibility (HY) -16000 + (ID) 4700
Total energy: -237321.0 ( -97.46 by residue)
QMean score : 0.585
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