Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITVVKRNGRIEPLDITKIQKYTKDATDNLE--GVSQSELEVDARLQFRDKITTEEIQQTLIKTAVDKIDIDTPNWSFVASRLFLYDLYHKVSGFT--GYR------HLKEYFENAEEKGRILKGFKEKFDLEFLNSQIKPERDFQFNYLGIKTLYDRYLLKDANNHPIELPQHMFMSIAMFLAQNEQELNKIALEFYEVLSKFEAMCATPTLANARTTKHQLSSCYIGST-PDNIEGIFDSYKEMALLSKYGGGIGWDFSLVRSIGSYIDGHKNASAGTIPFLKIANDVAIAVDQLGTRKGAIAVYLEIWHIDVMEFIDLRKNSGDERRRAHDLFPALWVCDLFMKRVLEDAMWTLFDPYECKDLTELYGQDFEKRYLEYEKDPKIIKEYINAKDLWKKILMNYFEAGLPFLAFKDNANRCNPNAHAGIIRSSNLCTEIFQNTAPNHYYMQIEYTDGAIEFFEEKELVTTDSNITKCANKLTSTDILKGKKIYIATKVAKDGQTAVCNLASINLSKINT------EEDIKRVVPIMVRLLDNVIDLNFYPNRKVKATNLQNRAIGLGVMGEAQMLAEHQIAWGSKEHLEKIDALMEQISYHAIDTSANLAKEKGVYKDFENSEWSKGIFPIDKANNEALKLTEKGLFNHACDWQGLREKVKANGMRNGYLMAIAPTSSISILVGTTQTIEPIYKKKWFEENLSGLIPVVVPN-------------------------------LNVETWNFYTSAYDIDAKDLIKAAAVRQKWIDQGQSINVFLRIENASGKTLHEIYTLAWKLGLKS-TYYLRSESPSIDEKSVLDRSVECFNCQ |
| 3HNC Chain:A ((14-742)) | --------------MFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELD-TLAAETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST-LDI-VLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKI-NGKVAERPQHMLMRVSVGIHKE---DIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQG-----AFAIYLEPWHLDIFEFLDLKK---------RDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQG-RVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEY--------------------------------------------------------TSKDEVAVCNLASLALNMYVTSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTP---------TDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEP--NYGKLTSMHFYGWKQGLKTGMYYLRTR-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HNC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -317878 for 5958 contacts (-53.4/contact) +
2D Compatibility (PS) -70572 + (NN) -25404 + (LL) 8164
1D Compatibility (HY) -46000 + (ID) 11950
Total energy: -463640.0 ( -77.82 by residue)
QMean score : 0.423
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