Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDDLIQKEFLAHKEALEKSLESLQDALKQSVHLLIETLENQGKILICGNGGSASDAQHFAAELTGRYKLERKGLSVISLSTDTSALTAIANDYGYEEVFARQVEALGNKEDILIGISTSGNSKNVLKAYEKAKDLGMKTLSLAGRDGGKMKPL---SDIALIVPSGDTPRIQEMHILMIHILCDCIERHFARKN
4U6N Chain:A ((8-200))
NVQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVNCLCDLIDNTLFP--
General information:
TITO was launched using:
RESULT:
Template:
4U6N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113892 for 1577 contacts (-72.2/contact) +
2D Compatibility (PS) -20949 + (NN) -12152 + (LL) -16
1D Compatibility (HY) -14400 + (ID) 4000
Total energy: -165409.0 ( -104.89 by residue)
QMean score : 0.674
(partial model without unconserved sides chains):
PDB file :
Tito_4U6N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U6N-query.scw
PDB file :
Tito_Scwrl_4U6N.pdb
: