Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSSILTDFEPKFLSSDDLLNLYAEYCNGHYCDFKYKQRRLSDGNIQSH-----LYFKKDHFIHDY--NGIETFKR-FIAVKAYDVDNITSLALSNLLCEKFNLDILLTIEAMDKERALFFIRERKKRSKDISYQNIE-YLEQMVSTDRAQIQK--VSLSIMVFANSKKELDKKSIIVYNTLKKEGFSAVLESINMRPIFFSFFPERN--------FLNSRL-RPQTSQNIASLIMFEKYQEGFKENSWGDCPVSVFKNQNGSAHFFNFQAKQGKDKNDNVVGHTMIIGSTGSGKSTFISFLIANLLTKYDMSVVALDRMNGLEIMTDFFEGQYNTA-NTDGGFYINPFSLKDSEENRQFLANWIKFMLNIDS---------DNQQDNKASQSIDKVIR-----DTYNYMGDQKNQINLLEIAKNLGSS--EQDFNEILKSQGEKIYFKNFQDCLDFSNSPLSVI--NMDAFANDKKLMGLIAMYLFHKLFFEAKEHNKPFFYSLMKLKTTLCIL-- |
| 5D2E Chain:A ((5-510)) | TMQIEQIVKKVKECSLTPEEGLELIKSLGKTHLYEMVWDRHEFKGSKKFPHTKEPILFFCEDDSMYTVMKRQLEGYEAPFIYVTSGE---------RFEDCRNGRFTMNFT-KGEDYDALCGVLRSQNIRPRHIIHFLAAGLFKNTEDAMRKQLNKSLYSLFQMFQAFMANKLCPKAEILYLYENAEG--EVQPIYNAVESFLKTVQAENPNFTCKAAELKSMFDEPFTKQHIADVISFEWNN-----------CFTCYEPR----HYYKRQLQRVKKSFSVKKNGVYLIT----GGAGGLGYLFAEYLAKQAEVKLILT---GRSPASRETAQKLSALENLGAEALYVPADISKEKETDALIKYIKQTFGELNGILHSAGLVKDAFIIKKTKESIEEVIAPKVFGTVWLDKAAEEEPLDFFVMFSSLSAVLPNAGQSDYAFANGCMDGFTQYRSMKGRPGKTLSINWPLWDAGALRHAGLELLSAQAGLAAFQDSMSRSASQLAVISGDKDRISELLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 5D2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87619 for 3452 contacts (-25.4/contact) +
2D Compatibility (PS) -45734 + (NN) -1818 + (LL) 1072
1D Compatibility (HY) -14400 + (ID) 3900
Total energy: -152399.0 ( -44.15 by residue)
QMean score : 0.202
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