Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQDKIIEILQISPIVPVVVVENIKDAVPLAQSLIEGGIPIIEVTLRSNCALEAIELIAKNVPKMRVGAGTILNLTQLEQAQNRGAEFLISPGLTIKLLEHAKKKDMPLIPGVSSSSEVMQALELGYNALKFFPAEYCGGVKLLNAFNGPFKGVKFCPTGGISADNMRSYLALENVVCVGGSWLTPKDLIQNKEWDKITEICKRALALR
1MXS Chain:A ((18-222))
---RIDAICEKARILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTPGITEDILEAGVDSEIPLLPGISTPSEIMMGYALGYRRFKLFPAEISGGVAAIKAFGGPFGDIRFCPTGGVNPANVRNYMALPNVMCVGTTWMLDSSWIKNGDWARIEACSAEAIALL
General information:
TITO was launched using:
RESULT:
Template:
1MXS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171407 for 1735 contacts (-98.8/contact) +
2D Compatibility (PS) -22887 + (NN) -16337 + (LL) 252
1D Compatibility (HY) -22000 + (ID) 4300
Total energy: -236679.0 ( -136.41 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_1MXS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MXS-query.scw
PDB file :
Tito_Scwrl_1MXS.pdb
: