Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNISVNPYLMAVVFVVFVLLLWAMNVWVYRPLLAFMDNRQAEIKDSLAKIKTDNTQSVEIGHQIETLLKEAAEKRREMLAEAIQKATESYDAVIKQKENELNQEFEAFAKQLQNEKQILKEQLQAQMTVFEDELNKRVAMGLGS |
2KZ9 Chain:A ((1-69)) | -------------------------------------------MASAITALTPNQVNDELNKMQAFIRKEAEEKAKEIQLKADQEYEIEKTNIVRNETNNIDGNFKSKLKKA-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9166 for 280 contacts (32.7/contact) +
2D Compatibility (PS) -7824 + (NN) -5003 + (LL) 7900
1D Compatibility (HY) 1200 + (ID) 750
Total energy: 4689.0 ( 16.75 by residue)
QMean score : 0.543
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