Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MICQRCGENKAVIALQQL--NELGKVESLYLCENCATDEALSSEKDLVKAMDTFSEVALDFLTLLQKEENTQKEVV-CENCQLSFEEFLKTNRVGCPECYSAFEAQLVPIIGRVQNGYKKHIGKVPAEVERAEGVQNEISRLQEKLAKLVKNEEFEEAAVVRDEIKALKAGGEDK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 2QKD Chain:A ((11-404)) | IESLCMNCYRNGTTRLLLTKIPFFREIIVSSFSCEHC------GWNNTEIQSAGRIQDQGVRYTLTVRSQEDMNREVVKTDSATTRIPEL----------------------------DFEIPAFSQKGALTTVEGLISRAISGLEQDQPTRRAVEGAIAERIDEFIGKLKDLKQMASPFTLVIDDPSGNSFVENPHAPQKDNALVITYYDRTPQQAEMLGLEEDLRNEVLQFNTNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHRTNEVKSGGAVEPLGTRITLHITDPSDMTRDLLKSETCSVEIPELEFELGMAVLGGKFTTLEGLLKDIRELVTKNPFTLGDSSNPDQSEKLQEFSQKLGQIIEGKMKAHFIMNDPAGNSYLQNVYAPEDDPEMKVERYKRTFDQNEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QKD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21471 for 759 contacts (28.3/contact) +
2D Compatibility (PS) -14596 + (NN) -208 + (LL) 2456
1D Compatibility (HY) 400 + (ID) 1050
Total energy: 8473.0 ( 11.16 by residue)
QMean score : 0.333
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