Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--LKVRNKVKQLREERGIGQNELALALEVSRQTIHAI-EKGKYNPSLELSLKMARYFRLTIEEIFQLEEN--------------------------------------
3OP9 Chain:A ((6-114))
IQHQFAENLSRLKKEHGLKNHQIAELLNVQTRTVAYYMS-GETKPDIEKLIRLATYFHLSIDELVGYVQEVWNDLSLKQWLLSLNLRSEEEIAKIKILVDTVETLYPN
General information:
TITO was launched using:
RESULT:
Template:
3OP9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32612 for 425 contacts (-76.7/contact) +
2D Compatibility (PS) -7102 + (NN) -2090 + (LL) 64
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -48540.0 ( -114.21 by residue)
QMean score : 0.754
(partial model without unconserved sides chains):
PDB file :
Tito_3OP9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OP9-query.scw
PDB file :
Tito_Scwrl_3OP9.pdb
: