Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLT--LSDLSDQNVVVDAYGVSPDE-AEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQL-EHLRSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNERFTVAGK |
3DHN Chain:A ((5-219)) | KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNP----IYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAP-GLRLMDSGE-VPENILPGVKALGEFYLNFLMKE-KEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGY- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -25748 for 1497 contacts (-17.2/contact) +
2D Compatibility (PS) -20324 + (NN) -836 + (LL) 180
1D Compatibility (HY) -2400 + (ID) 1700
Total energy: -50828.0 ( -33.95 by residue)
QMean score : 0.253
|
|
|