Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------MYEKARQMMIEAHSGQVRKIT-----------------GEPYF----------SHPLNVARILRRAGFRE-EVVVAGLLHDAVEDTEMTD--ADIRATFGDEV-ADLVASHTENKTLSWEE-------RKAHTIEQVRTGNLEEKALIVADKLDN--LTSVKYALS---------SEGKSVWSYFKRGYDLQKWYNQGIKN-NMEYGLNPSEIPPFFDEYARLVKWIFKK------------------- |
4N7R Chain:C ((48-299)) | STHKPFPAEVSRSIMELSSVGTLSTLTHDGWPLGVGVRFAVDKDGTPVLCLNRSVSPDKRSALHVQ--LEQCGLRTPQCTIQGSIGRPGDDTVLKRLSATWREKFGEEVKEDSLYVVAVDRVLQMEDFMEDGIWVASSDYKNASPDPLRDIAEDIVNQINANNMEDIFRFCNVYVDLDFVVSETKMIWMD-RLGFDLRVWSPRGVYDVRIPFPMEVTDEKGAKSSFNGMSQLAWEVEKSYCPADFNKVKLLKQVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3118 for 1220 contacts (2.6/contact) +
2D Compatibility (PS) -18552 + (NN) -242 + (LL) 436
1D Compatibility (HY) -8800 + (ID) 1750
Total energy: -25790.0 ( -21.14 by residue)
QMean score : 0.321
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