Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELLSVHVIPRPHSEVDAILPKSAE
4QIF Chain:E ((11-96))
---QEALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGHGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKIL-----
General information:
TITO was launched using:
RESULT:
Template:
4QIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35151 for 666 contacts (-52.8/contact) +
2D Compatibility (PS) -9463 + (NN) -2167 + (LL) 416
1D Compatibility (HY) -9600 + (ID) 3100
Total energy: -59065.0 ( -88.69 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_4QIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QIF-query.scw
PDB file :
Tito_Scwrl_4QIF.pdb
: