Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLGNDWDELLKNEFNQPYYLTLRQFLKKEYQT-KKVFPDMYDIFNALKHTAYKDVKVVILGQDPYHGPGQAHGLSFSVQQGVQI-PPSLQNIYLELHNDLNCEIPNNGYLIPWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVFLLWGSNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPIDWQIPSI
3A7N Chain:A ((41-238))
-------------------------QFLRAEIAAGRRYLPAGSNVLRAFTFP-FDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP--
General information:
TITO was launched using:
RESULT:
Template:
3A7N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101946 for 1564 contacts (-65.2/contact) +
2D Compatibility (PS) -21039 + (NN) -7052 + (LL) 1988
1D Compatibility (HY) -16800 + (ID) 4500
Total energy: -149349.0 ( -95.49 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3A7N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A7N-query.scw
PDB file :
Tito_Scwrl_3A7N.pdb
: