Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGED--IVAKSQTGSGKTAAFAIPIAEQVEWEENKPQ----ALIIVPTRELAMQVKTECTNIGR----FKRVKAAAIYGQSPF--AKQKLELSQKNHIVVGTPGRLLDHIEKGSLNVDK-VAHLVLDEVDEMLSMGFIDQVEDILSRLPKQR-------QNLFFSATMPEEMQDLIKRYQ----------------------DNPMVIEMASEK-TNPIF----HVEMQTDNKEKTLKDVLITENPDSAIIFCNT-KNQVDELTDLLDVKASKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDVDNVSLVINYDLPIEKENYVHRIGRTGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKKRKPTVIEVKVNEDAFRKKQQKRPTIKKARGEKLNKNIMKLYFNGGKKKKIRAVDFVGTISKLEGITAEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRRLKVNEARKR |
| 3SQX Chain:A ((28-419)) | -----LDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPN-IVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVI---SEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKK-----DLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELEDAKNIVIAKQEK---------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SQX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133846 for 2814 contacts (-47.6/contact) +
2D Compatibility (PS) -36949 + (NN) -10688 + (LL) 9480
1D Compatibility (HY) -30000 + (ID) 6350
Total energy: -208353.0 ( -74.04 by residue)
QMean score : 0.431
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