Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VHNPNLFNTLKQNEYTLPKDPNTSNEIIDTMLSYLSSTDSELRDNIAYNIFSEWLVVQ----DNLTTEQKMRIYNYAVNKNNLLFKINIIDSDAVFQRSFLALIIALLLENNKVHNFLTDSEIRETLNLLIELLKNEKNTHSFIEEKGWAHCIAHTADALDELIYQRTISEIDVKKIMTTIAFFYKTNTKMLTGEEDERLSNILITALFEQKISNEEVKNWLISISETIPSYLPEIPLINIKQFTQTLLIKLTVLNYDVDFSLFPIVTRYIRKNDDNSTNKKAL |
| 1LDD Chain:A ((780-835)) | ----------------------RSLPFIEGMLTNLGAMKLH----KIHSFLKITVPKDWGYNR-ITLQQLEGYLNTLADEGRL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22463 for 287 contacts (-78.3/contact) +
2D Compatibility (PS) -5360 + (NN) -106 + (LL) 17820
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -11759.0 ( -40.97 by residue)
QMean score : 0.454
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